Deep Learning Improves Biomedical Imaging

Optoacoustic imaging is particularly good at visualizing blood vessels. (Source: D. Razansky, ETHZ)

Scientists at ETH Zurich and the University of Zurich have used machine learning methods to improve opto­acoustic imaging. This relatively young medical imaging technique can be used for applications such as visualizing blood vessels, studying brain activity, charac­terizing skin lesions and diagnosing breast cancer. However, quality of the rendered images is very dependent on the number and distribution of sensors used by the device: the more of them, the better the image quality. The new approach developed by the ETH researchers allows for substantial reduction of the number of sensors without giving up on the resulting image quality. This makes it possible to reduce the device cost, increase imaging speed or improve diagnosis.

Opto­acoustics is similar in some respects to ultrasound imaging. In the latter, a probe sends ultrasonic waves into the body, which are reflected by the tissue. Sensors in the probe detect the returning sound waves and a picture of the inside of the body is subsequently generated. In opto­acoustic imaging, very short laser pulses are instead sent into the tissue, where they are absorbed and converted into ultra­sonic waves. Similarly to ultrasound imaging, the waves are detected and converted into images. The team led by Daniel Razansky, Professor of Biomedical Imaging at the Univer­sity of Zurich and ETH Zurich, searched for a way to enhance image quality of low-cost opto­acoustic devices that possess only a small number of ultrasonic sensors.

To do this, they started off by using a self-developed high-end opto­acoustic scanner having 512 sensors, which delivered superior-quality images. They had these pictures analysed by an artificial neural network, which was able to learn the features of the high-quality images. Next, the researchers discarded the majority of the sensors, so that only 128 or 32 sensors remained, with a detrimental effect on the image quality. Due to the lack of data, dis­tortions known as streak type artefacts appeared in the images. It turned out, however, that the previously trained neural network was able to largely correct for these distortions, thus bringing the image quality closer to the measure­ments obtained with all the 512 sensors.

In opto­acoustics, the image quality increases not only with the number of sensors used, but also when the information is captured from as many direc­tions as possible: the larger the sector in which the sensors are arranged around the object, the better the quality. The developed machine learning algorithm was also successful in improving quality of images that were recorded from just a narrowly circum­scribed sector. “This is particularly important for clinical appli­cations, as the laser pulses cannot penetrate the entire human body, hence the imaged region is normally only accessible from one direction,” according to Razansky.

The scientists stress that their approach is not limited to opto­acoustic imaging. Because the method operates on the reconstructed images, not the raw recorded data, it is also applicable to other imaging techniques. “You can basically use the same metho­dology to produce high-quality images from any sort of sparse data,” Razansky says. He explains that physicians are often confronted with the challenge of inter­preting poor quality images from patients. “We show that such images can be improved with AI methods, making it easier to attain more accurate diagnosis.”

For Razansky, this research work is a good example of what existing methods of arti­ficial intel­ligence can be used for. “Many people think that AI could replace human intelligence. This is probably exaggerated, at least for the currently available AI tech­nology,” he says. “It can’t replace human creativity, yet may release us from some laborious, repe­titive tasks.” In their current research, the scientists used an opto­acoustic tomography device customised for small animals, and trained the machine learning algorithms with images from mice. The next step will be to apply the method to opto­acoustic images from human patients, Razansky says. (Source: ETHZ)

Reference: N. Davoudi et al.: Deep learning optoacoustic tomography with sparse data, Nat. Mac. Intell., online 16. September 2019; DOI: 10.1038/s42256-019-0095-3

Link: Multi-Scale Functional & Molecular Imaging, Eidgenössische Technische Hochschule Zurich ETHZ, Zurich, Switzerland

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